The first set of Windows binaries are now uploaded. We are currently testing these across a range of computers and updating these regularly as issues become apparent. A list of known issues are in the release notes/readmes.
The paper describing PATHLOGIC-S has been published in PLoS One (7th August, 2012). If you use PATHLOGIC-S, please cite:
Fearnley, L.G., Nielsen, L.K. (2012) PATHLOGIC-S: A Scalable Boolean Framework for Modelling Cellular Signalling. PLoS One.
PATHLOGIC-S is tested to be compatible with Cytoscape 2.8.2 and lpsolve 5.5.2. Earlier versions of these SHOULD work - report any problems to the bug tracker here.
An implementation of PATHLOGIC-ST, the next generation of the PATHLOGIC system, is currently undergoing testing pre-release.
PATHLOGIC
Software for simulation of large-scale signalling systems.
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